Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015788156.1_cds_XP_016449285.1_412
CDS Infomation

[gene=LOC107774115] [db_xref=GeneID:107774115] [protein=carbon catabolite repressor protein 4 homolog 6 isoform X4] [protein_id=XP_016449285.1] [location=join(33309..33338,38353..38460,40006..40071,42147..42199,42710..42791,42905..42951,45998..46079,48042..48134,48311..48343,48468..48562,49548..50706,50795..50886,51167..51251,55882..55971)] [gbkey=CDS]
Sequence

ATGCTAGACCTGGACCTCCGCCTCATTGTGAGAAAACTTTACTATCACATACCACAACAT
ATTTTAGACTGGGAATGGCGTAAAAGAAGTATTCTTTCTGAGCTTGGATGGTGGTCAGCT
GACATATTGTGTTTTCAGGAGGTTGACAGATTCCAAGAGTTGGAGGCAGAATTGAAGTTG
CGTGAATATAATGGCATCTGGAAGAGGCGCACTGGAGATCCAGCTGATGGATGTGCAATA
TTTTGGAATGCGTCAAGATTCAAGTTGGTGCATGAAGAATTTATTGAATTTAAAAAGTTC
GGGCTACGGGATAATGTAGCTCAGATATGTGTATTTGAGTCTCTGGGTCAGCAAAATAAG
AGTGTCGCACCAGCTCTCTCAGCAAGACCTGGTCACTCCAATAAGGTTGTAATTTGTAAT
ACTCATGTGCTTTTCAATCCTAGAAGGGGAGAGATTAAGCTTGGACAGGTTAGGTTGCTT
CTGGATAAGGCTGATGGTGTTTCAAAACTTTGGGACAATGCTCCTGTTGTGATCTGTGGA
GATTTTAACAGTACACCAAAGAGTCCATTGTACAACTATATTGTCGAGAAAAGGCTAGAC
TTATCAGAAGTGCCTCGGGATAAAGTGTCAGGACAGGAGTCTGCTACAATTAATACAGTG
AAACATAGCAGCCTCAATCCTAGTGCTAGACACCAGGATGCAGTTAACTCTGCTCAAAGC
TCTGCACTGGCTGCTGAGAGAGATGTAAAAGACAGTAAGATGACATTAGATGAACAAAAG
CTCGATTCTCCTAAAAACGATTCAGCAAGTGGATCTTCTGTATGTATCTTGTCTCAGCCT
CAGAGTCCTGTGGTATATGAGTCCGGCAGTTCTTGTATGGTTATCCCATGCTCTAAGGGT
ACGAATGAGTTACCTAGAGAAACTCATGGTAATGTTTCTGTTGGTGTCTTTAGAGAAGAT
CCAAGTAGTTCTCGTGGTGAAGGTTCATTGTTTCCAGTTGAAGGTACGAGTCATGAAGTA
AGTTCGCTAGAATCTTTTCAAGAAGATGAATATGATAAAGACACTCACGGTAGATGCAAG
GATGCCAACCCTAATGCGACATCTAGCTCTTCTCACAAAACTTTTGAAGCAGAAGTGTGT
TCCGGAACCGATTCATATAGACAGAAGGATAGACAGTCCAAAGTAGATGGTTTTGGTTCT
GAAAATGTGATGAGTGTTCACGGACCTACAATAGCCAATTCAGATGTGTCATCGTTGGGG
CTATTTTCTGATTCTTCAAATGTACATGAAGTTTCTCCTCTGGAAACCTCTGAAAGCGTA
TCATCAATTGGTAAAGAGAGTTGCACTAAAACGTCACATGAACATAAAACCTCATACGCA
GAGACATGTTTTGATGTTTTATTGGACGAAAAGATGGACAGCTTGTCACTTAATGAGGTA
TCTGGAGGCACAAAAGAAGATGAACTTTTAGGCCACGATCGTGAAACATTTTTGTCCCAG
TTAAATGGTGAAGATGATTCCTTTCCATCTCACTCTAACCAATTTCAAAAAACTGCTCTT
GAGGAATTGAATGATTCCTTCAAGAAGTGTTACGGTTCCTTAGAGTTGCGTCCACTAGGA
GACGAGATAGCAGATGATGTTCCTGATTTGGATTCTGAGGTTGTTGACCTGGAGAAGTCT
ACTTATGATCCATCAGCTTGGACTCCAATGGATTTAGAAACTGCTACAGGCAATGCGGAT
TGCACAATAGTGGAACATAATCTGAAGTTGGCAAGTTCATATAGGGAAGTAGAGGTAGCT
CTTATTAGACTAAGCGTGTACTCTCAATGTGCTATACTGTATCTTATGTTTCAGGATTTT
ATTGGAACAAGAGATTCAACAGGAGAACCTGAGGTGACCAGCTATCACAGGCTTTTCATG
GGTACAGTTGATTATATATGGCGTTCTGAAGGTCTTCAAACTGTGAGGGTGCTTGCTCCC
ATTCCAAAAAACGCCATGCAATTTGTGAGAGGTTTCCCTACTAAGAAGTGGGGAAGTGAT
CATATTGCTTTGGTTTCGGAATTGGCTTTCACTAATGATACATCGGCCCATGATACTAGC
GTCCAAAATCAGTAA

Peptide Sequence

PEP ID

XP_016449285.1
PEP Infomation

PREDICTED: carbon catabolite repressor protein 4 homolog 6 isoform X4 [Nicotiana tabacum]
Sequence

MLDLDLRLIVRKLYYHIPQHILDWEWRKRSILSELGWWSADILCFQEVDRFQELEAELKL
REYNGIWKRRTGDPADGCAIFWNASRFKLVHEEFIEFKKFGLRDNVAQICVFESLGQQNK
SVAPALSARPGHSNKVVICNTHVLFNPRRGEIKLGQVRLLLDKADGVSKLWDNAPVVICG
DFNSTPKSPLYNYIVEKRLDLSEVPRDKVSGQESATINTVKHSSLNPSARHQDAVNSAQS
SALAAERDVKDSKMTLDEQKLDSPKNDSASGSSVCILSQPQSPVVYESGSSCMVIPCSKG
TNELPRETHGNVSVGVFREDPSSSRGEGSLFPVEGTSHEVSSLESFQEDEYDKDTHGRCK
DANPNATSSSSHKTFEAEVCSGTDSYRQKDRQSKVDGFGSENVMSVHGPTIANSDVSSLG
LFSDSSNVHEVSPLETSESVSSIGKESCTKTSHEHKTSYAETCFDVLLDEKMDSLSLNEV
SGGTKEDELLGHDRETFLSQLNGEDDSFPSHSNQFQKTALEELNDSFKKCYGSLELRPLG
DEIADDVPDLDSEVVDLEKSTYDPSAWTPMDLETATGNADCTIVEHNLKLASSYREVEVA
LIRLSVYSQCAILYLMFQDFIGTRDSTGEPEVTSYHRLFMGTVDYIWRSEGLQTVRVLAP
IPKNAMQFVRGFPTKKWGSDHIALVSELAFTNDTSAHDTSVQNQ

Transcript Sequence

Gene sequence data has not been registered.